Burkholderia thailandensis E264 ATCC 700388, BTH_II1281 (ribD-2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008270 zinc ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00903
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016787 hydrolase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00903
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009231 riboflavin biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00326
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00326
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53927
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055114 oxidation-reduction process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00326
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bte01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bte00740 Riboflavin metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc toxoflavin biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00740 Riboflavin metabolism InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.430.10 IPR024072 Dihydrofolate reductase-like domain superfamily 142 340 1.8E-9
TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD IPR004794 Riboflavin biosynthesis protein RibD 12 198 1.4E-62
Gene3D G3DSA:3.40.140.10 3 140 9.4E-43
ProSiteProfiles PS51747 Cytidine and deoxycytidylate deaminases domain profile. IPR002125 Cytidine and deoxycytidylate deaminase domain 6 128 23.829
CDD cd01284 Riboflavin_deaminase-reductase 12 124 6.61097E-49
Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IPR002125 Cytidine and deoxycytidylate deaminase domain 9 104 1.7E-17
PIRSF PIRSF006769 IPR004794 Riboflavin biosynthesis protein RibD 4 201 1.3E-70
SUPERFAMILY SSF53927 IPR016193 Cytidine deaminase-like 8 149 6.02E-44
PIRSF PIRSF006769 IPR004794 Riboflavin biosynthesis protein RibD 253 374 1.3E-6
ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. IPR016192 APOBEC/CMP deaminase, zinc-binding 55 93 -
SUPERFAMILY SSF53597 IPR024072 Dihydrofolate reductase-like domain superfamily 150 373 4.77E-9

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.