Burkholderia pseudomallei K96243, BPSS2094 (TssH-6)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PS00870	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0019538	protein metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF81923	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	bps03070	Bacterial secretion system	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF07724	AAA domain (Cdc48 subfamily)	IPR003959	ATPase, AAA-type, core	616	782	5.3E-38
Gene3D	G3DSA:3.40.50.300				569	786	1.6E-64
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	727	741	1.0E-31
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	665	683	1.0E-31
Coils	Coil				439	459	-
Coils	Coil				522	542	-
CDD	cd00009	AAA			600	743	4.90432E-16
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	565	881	1.65E-65
Gene3D	G3DSA:1.10.8.60				788	886	5.4E-12
SMART	SM01086		IPR019489	Clp ATPase, C-terminal	788	880	2.2E-14
Gene3D	G3DSA:1.10.1780.10		IPR036628	Clp, N-terminal domain superfamily	1	160	3.4E-42
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	694	712	1.0E-31
TIGRFAM	TIGR03345	VI_ClpV1: type VI secretion ATPase, ClpV1 family	IPR017729	Type VI secretion system, ATPase ClpV1	14	872	0.0
Pfam	PF10431	C-terminal, D2-small domain, of ClpB protein	IPR019489	Clp ATPase, C-terminal	788	862	5.6E-12
Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	IPR003959	ATPase, AAA-type, core	230	332	1.4E-9
Pfam	PF17871	AAA lid domain	IPR041546	ClpA/ClpB, AAA lid domain	372	460	1.6E-28
SMART	SM00382		IPR003593	AAA+ ATPase domain	616	776	1.5E-11
ProSitePatterns	PS00870	Chaperonins clpA/B signature 1.	IPR018368	ClpA/B, conserved site 1	321	333	-
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	187	508	1.43E-71
SMART	SM00382		IPR003593	AAA+ ATPase domain	225	370	8.8E-10
CDD	cd00009	AAA			208	363	9.96909E-17
Gene3D	G3DSA:3.40.50.300				371	563	5.0E-45
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	620	638	1.0E-31
Gene3D	G3DSA:3.40.50.300				178	369	9.4E-62
SUPERFAMILY	SSF81923		IPR036628	Clp, N-terminal domain superfamily	12	128	3.4E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.