Burkholderia pseudomallei K96243, BPSS0879

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0015288 porin activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00182
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00182
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00184
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0034220 ion transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00182
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009279 cell outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00182
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.40.160.10 IPR023614 Porin domain superfamily 10 374 1.6E-88
Pfam PF13609 Gram-negative porin IPR033900 Porin domain, Gram-negative type 8 342 6.8E-54
PRINTS PR00184 Neisseria sp. porin signature IPR002299 Porin, Neisseria sp. type 189 206 2.1E-7
PRINTS PR00182 E.coli/Neisseria porin superfamily signature IPR001702 Porin, Gram-negative type 99 109 1.5E-6
SUPERFAMILY SSF56935 21 374 7.94E-85
CDD cd00342 gram_neg_porins IPR033900 Porin domain, Gram-negative type 22 374 2.44954E-86
PRINTS PR00184 Neisseria sp. porin signature IPR002299 Porin, Neisseria sp. type 314 338 2.1E-7
PRINTS PR00184 Neisseria sp. porin signature IPR002299 Porin, Neisseria sp. type 57 82 2.1E-7
PRINTS PR00182 E.coli/Neisseria porin superfamily signature IPR001702 Porin, Gram-negative type 161 172 1.5E-6
PRINTS PR00182 E.coli/Neisseria porin superfamily signature IPR001702 Porin, Gram-negative type 317 334 1.5E-6
PRINTS PR00182 E.coli/Neisseria porin superfamily signature IPR001702 Porin, Gram-negative type 188 200 1.5E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.