Burkholderia pseudomallei K96243, BPSS0372
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0016829 | lyase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF05681
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0004333 | fumarate hydratase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001394
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0016836 | hydro-lyase activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00723
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0006091 | generation of precursor metabolites and energy |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001394
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | bps01200 | Carbon metabolism | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | bps00020 | Citrate cycle (TCA cycle) | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | bps01130 | Biosynthesis of antibiotics | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | bps01120 | Microbial metabolism in diverse environments | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | bps00620 | Pyruvate metabolism | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | bps01110 | Biosynthesis of secondary metabolites | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | bps01100 | Metabolic pathways | 73.0+/03-31, Mar 15 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF05683 | Fumarase C-terminus | IPR004647 | Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain | 293 | 494 | 6.4E-84 |
| SUPERFAMILY | SSF117457 | IPR036660 | Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily | 323 | 492 | 8.11E-63 | |
| PIRSF | PIRSF001394 | IPR011167 | Iron-dependent fumarate hydratase | 1 | 511 | 7.8E-219 | |
| Gene3D | G3DSA:3.20.130.10 | IPR036660 | Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily | 286 | 494 | 3.1E-59 | |
| Pfam | PF05681 | Fumarate hydratase (Fumerase) | IPR004646 | Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain | 11 | 289 | 3.2E-99 |
| TIGRFAM | TIGR00723 | ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type | IPR004647 | Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain | 331 | 493 | 1.8E-47 |
| TIGRFAM | TIGR00722 | ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type | IPR004646 | Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain | 12 | 290 | 3.2E-63 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.