Burkholderia pseudomallei K96243, BPSS0058 (uvrA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0009380 excinuclease repair complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00630
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50893
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50893
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50893
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006289 nucleotide-excision repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00630
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006289 nucleotide-excision repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00630
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00630
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00630
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50893
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009380 excinuclease repair complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00630
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bps03420 Nucleotide excision repair 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF17755 UvrA DNA-binding domain IPR041552 UvrA DNA-binding domain 297 361 7.0E-8
Gene3D G3DSA:3.40.50.300 646 984 3.9E-125
SMART SM00382 IPR003593 AAA+ ATPase domain 1596 1918 2.8
Gene3D G3DSA:1.20.1580.10 721 863 3.9E-125
Gene3D G3DSA:3.40.50.300 1298 1552 5.6E-56
Gene3D G3DSA:1.20.1580.10 1717 1883 2.5E-130
Gene3D G3DSA:3.30.190.20 1147 1266 2.4E-28
Gene3D G3DSA:3.30.190.20 133 237 6.3E-202
ProSitePatterns PS00211 ABC transporters family signature. IPR017871 ABC transporter, conserved site 1833 1847 -
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 1578 1926 3.53E-42
TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A IPR004602 UvrABC system subunit A 7 972 1.9E-269
ProSitePatterns PS00211 ABC transporters family signature. IPR017871 ABC transporter, conserved site 863 877 -
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 6 597 7.72E-39
Gene3D G3DSA:3.40.50.300 1012 1133 1.6E-21
Gene3D G3DSA:3.40.50.300 9 622 6.3E-202
Gene3D G3DSA:1.20.1580.10 93 520 6.3E-202
MobiDBLite mobidb-lite consensus disorder prediction 1334 1349 -
SMART SM00382 IPR003593 AAA+ ATPase domain 1045 1519 4.8
SMART SM00382 IPR003593 AAA+ ATPase domain 662 954 0.96
MobiDBLite mobidb-lite consensus disorder prediction 1334 1364 -
Gene3D G3DSA:3.40.50.300 1580 1948 2.5E-130
Gene3D G3DSA:1.10.8.280 294 399 6.3E-202
Pfam PF17760 UvrA interaction domain IPR041102 UvrA, interaction domain 1152 1255 4.2E-19
ProSitePatterns PS00211 ABC transporters family signature. IPR017871 ABC transporter, conserved site 1442 1456 -
CDD cd03270 ABC_UvrA_I 1418 1530 3.06657E-62
ProSiteProfiles PS50893 ATP-binding cassette, ABC transporter-type domain profile. IPR003439 ABC transporter-like 1020 1542 8.83
ProSiteProfiles PS50893 ATP-binding cassette, ABC transporter-type domain profile. IPR003439 ABC transporter-like 195 615 9.331
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 648 957 4.14E-36
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 1028 1524 1.22E-39

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.