Burkholderia pseudomallei K96243, BPSL3396 (atpD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015986 ATP synthesis coupled proton transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01347
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0046034 ATP metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02874
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01347
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00006
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01347
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:1902600 proton transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02874
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG (InterPro) 00195 Photosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00190 Oxidative phosphorylation InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bps00190 Oxidative phosphorylation 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc ATP biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG bps01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00382 IPR003593 AAA+ ATPase domain 145 330 0.007
Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain 11 76 3.8E-18
Gene3D G3DSA:3.40.50.300 79 347 1.8E-115
SUPERFAMILY SSF47917 348 463 1.36E-54
Gene3D G3DSA:2.40.10.170 5 78 3.3E-29
ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site 336 345 -
CDD cd01133 F1-ATPase_beta 78 350 0.0
CDD cd18110 ATP-synt_F1_beta_C 352 459 3.42436E-80
TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit IPR005722 ATP synthase, F1 complex, beta subunit 8 463 1.4E-250
Gene3D G3DSA:1.10.1140.10 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal 348 464 1.7E-59
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 80 350 4.21E-92
Hamap MF_01347 ATP synthase subunit beta [atpB]. IPR005722 ATP synthase, F1 complex, beta subunit 6 463 57.207
CDD cd18115 ATP-synt_F1_beta_N 7 79 1.22373E-30
SUPERFAMILY SSF50615 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily 8 78 1.67E-23
Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain 133 345 5.5E-64

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.