Burkholderia pseudomallei K96243, BPSL3362 (gcvP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006544 glycine metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00711
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.90.1150.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006546 glycine catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00613
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055114 oxidation-reduction process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00613
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004375 glycine dehydrogenase (decarboxylating) activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00613
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bps01100 Metabolic pathways 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps00260 Glycine, serine and threonine metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG bps01200 Carbon metabolism 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG (InterPro) 00260 Glycine, serine and threonine metabolism InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.640.10 IPR015421 Pyridoxal phosphate-dependent transferase, major domain 110 368 5.8E-109
Gene3D G3DSA:3.90.1150.10 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 782 922 5.6E-41
CDD cd00613 GDC-P IPR020581 Glycine cleavage system P protein 500 890 2.0627E-150
Pfam PF02347 Glycine cleavage system P-protein IPR020581 Glycine cleavage system P protein 28 454 6.5E-179
Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. IPR003437 Glycine dehydrogenase (decarboxylating) 20 974 25.876
SUPERFAMILY SSF53383 IPR015424 Pyridoxal phosphate-dependent transferase 496 969 2.34E-101
Pfam PF02347 Glycine cleavage system P-protein IPR020581 Glycine cleavage system P protein 492 760 4.0E-11
SUPERFAMILY SSF53383 IPR015424 Pyridoxal phosphate-dependent transferase 29 457 8.43E-102
CDD cd00613 GDC-P IPR020581 Glycine cleavage system P protein 91 454 2.23586E-145
Gene3D G3DSA:3.40.640.10 IPR015421 Pyridoxal phosphate-dependent transferase, major domain 542 770 1.3E-59
TIGRFAM TIGR00461 gcvP: glycine dehydrogenase IPR003437 Glycine dehydrogenase (decarboxylating) 29 968 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.