Burkholderia pseudomallei K96243, BPSL3101 (tssH-1)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0033103	protein secretion by the type VI secretion system	TAS Traceable Author Statement	ECO:0000304 traceable author statement used in manual assertion	17660433	Reviewed by curator
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PS00870	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0019538	protein metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:G3DSA:1.10.1780.10	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	bps03070	Bacterial secretion system	73.0+/03-31, Mar 15	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:3.40.50.300				180	371	2.8E-64
SMART	SM00382		IPR003593	AAA+ ATPase domain	619	779	7.0E-10
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	568	872	2.21E-64
Gene3D	G3DSA:3.40.50.300				572	791	9.7E-69
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	188	517	6.0E-70
Gene3D	G3DSA:1.10.1780.10		IPR036628	Clp, N-terminal domain superfamily	1	160	2.0E-48
Pfam	PF17871	AAA lid domain	IPR041546	ClpA/ClpB, AAA lid domain	374	467	1.3E-28
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	730	744	2.1E-34
Pfam	PF02861	Clp amino terminal domain, pathogenicity island component	IPR004176	Clp, N-terminal	29	74	9.0E-11
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	668	686	2.1E-34
Gene3D	G3DSA:1.10.8.60				793	887	6.3E-11
SUPERFAMILY	SSF81923		IPR036628	Clp, N-terminal domain superfamily	11	128	4.05E-20
Pfam	PF07724	AAA domain (Cdc48 subfamily)	IPR003959	ATPase, AAA-type, core	619	788	1.4E-42
Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	IPR003959	ATPase, AAA-type, core	232	344	1.6E-9
SMART	SM01086		IPR019489	Clp ATPase, C-terminal	793	886	2.0E-9
CDD	cd00009	AAA			593	741	8.93433E-16
Coils	Coil				441	461	-
SMART	SM00382		IPR003593	AAA+ ATPase domain	227	372	2.1E-9
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	623	641	2.1E-34
ProSitePatterns	PS00870	Chaperonins clpA/B signature 1.	IPR018368	ClpA/B, conserved site 1	323	335	-
TIGRFAM	TIGR03345	VI_ClpV1: type VI secretion ATPase, ClpV1 family	IPR017729	Type VI secretion system, ATPase ClpV1	12	876	0.0
Coils	Coil				476	503	-
Gene3D	G3DSA:3.40.50.300				374	566	1.9E-42
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	697	715	2.1E-34
CDD	cd00009	AAA			210	365	3.27353E-16
Pfam	PF10431	C-terminal, D2-small domain, of ClpB protein	IPR019489	Clp ATPase, C-terminal	794	869	2.6E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.