Burkholderia pseudomallei K96243, BPSL2911 (rplM)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00392
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00392
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00392
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00392
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00392
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00392
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
KEGG bps03010 Ribosome 73.0+/03-31, Mar 15 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 IPR005823 Ribosomal protein L13, bacterial-type 5 141 4.9E-62
Pfam PF00572 Ribosomal protein L13 IPR005822 Ribosomal protein L13 14 138 9.8E-55
SUPERFAMILY SSF52161 IPR036899 Ribosomal protein L13 superfamily 1 139 1.83E-59
Gene3D G3DSA:3.90.1180.10 IPR036899 Ribosomal protein L13 superfamily 1 142 8.3E-61
CDD cd00392 Ribosomal_L13 IPR005822 Ribosomal protein L13 15 126 1.1513E-61
Hamap MF_01366 50S ribosomal protein L13 [rplM]. IPR005822 Ribosomal protein L13 15 141 27.352
PIRSF PIRSF002181 IPR005822 Ribosomal protein L13 1 142 3.1E-49

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.