Burkholderia pseudomallei K96243, BPSL2151
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0019867 | outer membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF07244
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0071709 | membrane assembly |
Inferred from Sequence Model
Term mapped from: InterPro:MF_01430
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0019867 | outer membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF07244
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0071709 | membrane assembly |
Inferred from Sequence Model
Term mapped from: InterPro:MF_01430
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF07244 | Surface antigen variable number repeat | IPR010827 | POTRA domain, BamA/TamA-like | 354 | 427 | 1.2E-12 |
| Pfam | PF07244 | Surface antigen variable number repeat | IPR010827 | POTRA domain, BamA/TamA-like | 100 | 179 | 4.8E-12 |
| ProSiteProfiles | PS51779 | POTRA domain profile. | IPR034746 | POTRA domain | 273 | 351 | 14.288 |
| Gene3D | G3DSA:3.10.20.310 | 275 | 350 | 5.4E-18 | |||
| PIRSF | PIRSF006076 | IPR023707 | Outer membrane protein assembly factor BamA | 2 | 769 | 6.9E-256 | |
| Gene3D | G3DSA:3.10.20.310 | 355 | 431 | 9.5E-25 | |||
| ProSiteProfiles | PS51779 | POTRA domain profile. | IPR034746 | POTRA domain | 31 | 98 | 14.653 |
| Gene3D | G3DSA:3.10.20.310 | 99 | 180 | 3.3E-18 | |||
| Gene3D | G3DSA:2.40.160.50 | 432 | 769 | 1.0E-102 | |||
| Gene3D | G3DSA:3.10.20.310 | 182 | 273 | 3.7E-24 | |||
| ProSiteProfiles | PS51779 | POTRA domain profile. | IPR034746 | POTRA domain | 354 | 428 | 16.714 |
| Pfam | PF01103 | Surface antigen | IPR000184 | Bacterial surface antigen (D15) | 455 | 769 | 2.7E-75 |
| Pfam | PF07244 | Surface antigen variable number repeat | IPR010827 | POTRA domain, BamA/TamA-like | 32 | 97 | 2.9E-6 |
| Gene3D | G3DSA:3.10.20.310 | 24 | 98 | 3.1E-23 | |||
| Pfam | PF07244 | Surface antigen variable number repeat | IPR010827 | POTRA domain, BamA/TamA-like | 273 | 350 | 8.6E-13 |
| ProSiteProfiles | PS51779 | POTRA domain profile. | IPR034746 | POTRA domain | 182 | 270 | 14.197 |
| TIGRFAM | TIGR03303 | OM_YaeT: outer membrane protein assembly complex, YaeT protein | IPR023707 | Outer membrane protein assembly factor BamA | 31 | 769 | 2.9E-271 |
| ProSiteProfiles | PS51779 | POTRA domain profile. | IPR034746 | POTRA domain | 99 | 179 | 10.531 |
| Hamap | MF_01430 | Outer membrane protein assembly factor BamA [bamA]. | IPR023707 | Outer membrane protein assembly factor BamA | 9 | 769 | 26.047 |
| Pfam | PF07244 | Surface antigen variable number repeat | IPR010827 | POTRA domain, BamA/TamA-like | 183 | 270 | 5.5E-19 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.