Burkholderia pseudomallei K96243, BPSL1484 (clpB)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0019538	protein metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF81923	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0042026	protein refolding	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR03346	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0005737	cytoplasm	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR03346	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PS00870	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0009408	response to heat	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR03346	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	692	710	1.3E-42
Gene3D	G3DSA:3.40.50.300				566	780	4.9E-89
Pfam	PF17871	AAA lid domain	IPR041546	ClpA/ClpB, AAA lid domain	353	453	5.4E-36
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	725	739	1.3E-42
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	663	681	1.3E-42
SUPERFAMILY	SSF81923		IPR036628	Clp, N-terminal domain superfamily	15	167	8.83E-41
CDD	cd00009	AAA			192	352	8.42898E-23
Pfam	PF02861	Clp amino terminal domain, pathogenicity island component	IPR004176	Clp, N-terminal	28	79	1.4E-12
Gene3D	G3DSA:1.10.1780.10		IPR036628	Clp, N-terminal domain superfamily	12	157	2.9E-34
Pfam	PF02861	Clp amino terminal domain, pathogenicity island component	IPR004176	Clp, N-terminal	105	156	6.0E-9
Gene3D	G3DSA:3.40.50.300				354	561	8.3E-68
Pfam	PF07724	AAA domain (Cdc48 subfamily)	IPR003959	ATPase, AAA-type, core	613	775	7.6E-55
Pfam	PF10431	C-terminal, D2-small domain, of ClpB protein	IPR019489	Clp ATPase, C-terminal	782	860	2.3E-22
Coils	Coil				445	472	-
SMART	SM01086		IPR019489	Clp ATPase, C-terminal	782	871	1.3E-32
ProSitePatterns	PS00870	Chaperonins clpA/B signature 1.	IPR018368	ClpA/B, conserved site 1	305	317	-
Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	IPR003959	ATPase, AAA-type, core	214	346	4.1E-14
Coils	Coil				423	443	-
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	170	561	2.22E-99
SMART	SM00382		IPR003593	AAA+ ATPase domain	209	354	1.8E-12
Gene3D	G3DSA:1.10.8.60				782	875	3.5E-25
Coils	Coil				483	503	-
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	618	636	1.3E-42
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	563	870	7.47E-82
Gene3D	G3DSA:3.40.50.300				158	353	5.5E-76
ProSitePatterns	PS00871	Chaperonins clpA/B signature 2.	IPR028299	ClpA/B, conserved site 2	648	666	-
CDD	cd00009	AAA			588	779	5.29129E-21
TIGRFAM	TIGR03346	chaperone_ClpB: ATP-dependent chaperone protein ClpB	IPR017730	Chaperonin ClpB	17	871	0.0
SMART	SM00382		IPR003593	AAA+ ATPase domain	614	784	5.5E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.