Burkholderia cenocepacia H111, I35_RS01750 (tssH)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0033103	protein secretion by the type VI secretion system	IMP Inferred from Mutant Phenotype	ECO:0000315 mutant phenotype evidence used in manual assertion	18316384	Reviewed by curator
Biological Process	GO:0019538	protein metabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF81923	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00004	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF07724	AAA domain (Cdc48 subfamily)	IPR003959	ATPase, AAA-type, core	619	787	8.5E-43
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	188	519	1.5E-70
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	668	686	2.1E-34
SMART	SM00382		IPR003593	AAA+ ATPase domain	619	779	2.6E-11
Gene3D	G3DSA:3.40.50.300				180	371	4.6E-64
Gene3D	G3DSA:3.40.50.300				572	791	1.1E-68
Pfam	PF02861	Clp amino terminal domain, pathogenicity island component	IPR004176	Clp, N-terminal	23	74	3.1E-8
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	730	744	2.1E-34
SUPERFAMILY	SSF81923		IPR036628	Clp, N-terminal domain superfamily	11	128	4.58E-17
Gene3D	G3DSA:1.10.8.60				793	888	1.2E-9
Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	IPR003959	ATPase, AAA-type, core	232	344	1.6E-9
Pfam	PF17871	AAA lid domain	IPR041546	ClpA/ClpB, AAA lid domain	374	466	4.4E-29
SMART	SM01086		IPR019489	Clp ATPase, C-terminal	793	884	4.6E-7
Gene3D	G3DSA:1.10.1780.10		IPR036628	Clp, N-terminal domain superfamily	1	160	3.3E-45
CDD	cd00009	AAA			210	370	1.79898E-16
TIGRFAM	TIGR03345	VI_ClpV1: type VI secretion ATPase, ClpV1 family	IPR017729	Type VI secretion system, ATPase ClpV1	12	877	0.0
SMART	SM00382		IPR003593	AAA+ ATPase domain	227	372	1.7E-9
Coils	Coil				441	461	-
ProSitePatterns	PS00870	Chaperonins clpA/B signature 1.	IPR018368	ClpA/B, conserved site 1	323	335	-
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	623	641	2.1E-34
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	697	715	2.1E-34
Gene3D	G3DSA:3.40.50.300				374	566	7.6E-44
Pfam	PF10431	C-terminal, D2-small domain, of ClpB protein	IPR019489	Clp ATPase, C-terminal	794	866	7.7E-10
CDD	cd00009	AAA			593	741	3.69121E-17
SUPERFAMILY	SSF52540		IPR027417	P-loop containing nucleoside triphosphate hydrolase	568	860	1.76E-64

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.