Burkholderia cenocepacia AU 1054, BCEN_RS32290

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50110
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00448 IPR001789 Signal transduction response regulator, receiver domain 11 124 1.5E-36
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 13 125 2.6E-26
Pfam PF12833 Helix-turn-helix domain IPR018060 DNA binding HTH domain, AraC-type 176 255 3.6E-23
ProSiteProfiles PS01124 Bacterial regulatory proteins, araC family DNA-binding domain profile. IPR018060 DNA binding HTH domain, AraC-type 157 255 29.529
PRINTS PR00032 AraC bacterial regulatory protein HTH signature IPR020449 Transcription regulator HTH, AraC- type 222 237 8.4E-7
SUPERFAMILY SSF52172 IPR011006 CheY-like superfamily 6 139 4.98E-39
Gene3D G3DSA:3.40.50.2300 3 143 3.2E-35
CDD cd00156 REC IPR001789 Signal transduction response regulator, receiver domain 14 128 1.75033E-34
PRINTS PR00032 AraC bacterial regulatory protein HTH signature IPR020449 Transcription regulator HTH, AraC- type 237 253 8.4E-7
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 152 204 3.67E-7
ProSiteProfiles PS50110 Response regulatory domain profile. IPR001789 Signal transduction response regulator, receiver domain 12 128 41.424
SMART SM00342 IPR018060 DNA binding HTH domain, AraC-type 170 253 5.2E-29
SUPERFAMILY SSF46689 IPR009057 Homeobox-like domain superfamily 207 256 1.39E-12
Gene3D G3DSA:1.10.10.60 151 263 1.9E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.