Burkholderia cenocepacia AU 1054, BCEN_RS31925
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF00440
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48498 | IPR036271 | Tetracyclin repressor-like, C-terminal domain superfamily | 84 | 197 | 6.23E-23 | |
| Gene3D | G3DSA:1.10.357.10 | 74 | 198 | 1.5E-23 | |||
| Pfam | PF00440 | Bacterial regulatory proteins, tetR family | IPR001647 | DNA-binding HTH domain, TetR-type | 22 | 64 | 6.1E-11 |
| ProSiteProfiles | PS50977 | TetR-type HTH domain profile. | IPR001647 | DNA-binding HTH domain, TetR-type | 12 | 72 | 14.472 |
| SUPERFAMILY | SSF46689 | IPR009057 | Homeobox-like domain superfamily | 19 | 88 | 2.67E-13 | |
| Gene3D | G3DSA:1.10.10.60 | 4 | 71 | 1.7E-22 | |||
| ProSitePatterns | PS01081 | TetR-type HTH domain signature. | IPR023772 | DNA-binding HTH domain, TetR-type, conserved site | 30 | 61 | - |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.