Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF46689
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0043565 | sequence-specific DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
ProSiteProfiles | PS01124 | Bacterial regulatory proteins, araC family DNA-binding domain profile. | IPR018060 | DNA binding HTH domain, AraC-type | 20 | 117 | 23.861 |
Pfam | PF12833 | Helix-turn-helix domain | IPR018060 | DNA binding HTH domain, AraC-type | 39 | 114 | 1.1E-19 |
SMART | SM00342 | IPR018060 | DNA binding HTH domain, AraC-type | 33 | 115 | 1.2E-25 | |
Gene3D | G3DSA:1.10.10.60 | 18 | 119 | 5.2E-26 | |||
SUPERFAMILY | SSF46689 | IPR009057 | Homeobox-like domain superfamily | 18 | 66 | 3.94E-9 | |
SUPERFAMILY | SSF46689 | IPR009057 | Homeobox-like domain superfamily | 69 | 114 | 2.69E-8 |