Burkholderia cenocepacia AU 1054, BCEN_RS31800

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PS50931	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PS50931	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family	IPR000847	Transcription regulator HTH, LysR	7	66	1.3E-22
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	43	54	5.7E-10
ProSiteProfiles	PS50931	LysR-type HTH domain profile.	IPR000847	Transcription regulator HTH, LysR	5	62	32.445
CDD	cd08440	PBP2_LTTR_like_4			96	292	3.1876E-83
SUPERFAMILY	SSF53850				95	297	2.72E-46
Gene3D	G3DSA:1.10.10.10		IPR036388	Winged helix-like DNA-binding domain superfamily	5	96	1.2E-27
Gene3D	G3DSA:3.40.190.290				97	301	1.5E-51
SUPERFAMILY	SSF46785		IPR036390	Winged helix DNA-binding domain superfamily	4	115	2.43E-27
Pfam	PF03466	LysR substrate binding domain	IPR005119	LysR, substrate-binding	95	295	6.6E-47
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	22	33	5.7E-10
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	33	43	5.7E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.