Burkholderia cenocepacia AU 1054, BCEN_RS30555
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 324 | 484 | 2.1E-51 |
| ProSiteProfiles | PS50887 | GGDEF domain profile. | IPR000160 | GGDEF domain | 354 | 490 | 35.277 |
| CDD | cd12915 | PDC2_DGC_like | 186 | 281 | 3.89722E-23 | ||
| CDD | cd12914 | PDC1_DGC_like | 60 | 184 | 3.44414E-22 | ||
| Gene3D | G3DSA:3.30.450.20 | 31 | 182 | 1.1E-31 | |||
| TIGRFAM | TIGR00254 | GGDEF: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 323 | 487 | 1.7E-54 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 20 | 6.0 | ||
| SUPERFAMILY | SSF55073 | IPR029787 | Nucleotide cyclase | 329 | 487 | 1.05E-48 | |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 325 | 486 | 3.54003E-62 |
| Gene3D | G3DSA:3.30.450.20 | 185 | 274 | 5.2E-25 | |||
| Gene3D | G3DSA:3.30.70.270 | 311 | 487 | 2.7E-61 | |||
| SMART | SM00267 | IPR000160 | GGDEF domain | 313 | 488 | 1.5E-68 | |
| Pfam | PF02743 | Cache domain | IPR033479 | Double Cache domain 1 | 61 | 270 | 2.1E-17 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.