Burkholderia cenocepacia AU 1054, BCEN_RS27515

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd07377
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd07377
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd07377
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd07377
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.120.530 IPR008920 Transcription regulator FadR/GntR, C-terminal 68 208 2.6E-20
CDD cd07377 WHTH_GntR IPR000524 Transcription regulator HTH, GntR 9 71 1.89376E-15
Pfam PF00392 Bacterial regulatory proteins, gntR family IPR000524 Transcription regulator HTH, GntR 12 70 1.2E-16
Pfam PF07729 FCD domain IPR011711 GntR, C-terminal 80 201 6.2E-19
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 9 74 3.93E-17
SMART SM00895 IPR011711 GntR, C-terminal 80 203 1.4E-13
SUPERFAMILY SSF48008 IPR008920 Transcription regulator FadR/GntR, C-terminal 76 204 7.32E-20
CDD cd02205 CBS_pair_SF 45 133 0.00368764
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 6 67 2.8E-17
ProSiteProfiles PS50949 GntR-type HTH domain profile. IPR000524 Transcription regulator HTH, GntR 6 73 17.513
SMART SM00345 IPR000524 Transcription regulator HTH, GntR 12 70 9.9E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.