Burkholderia cenocepacia AU 1054, BCEN_RS14035

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50931
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50931
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 23 110 8.3E-26
CDD cd08422 PBP2_CrgA_like 113 307 6.09855E-62
Gene3D G3DSA:3.40.190.290 112 312 1.0E-58
Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IPR000847 Transcription regulator HTH, LysR 25 83 1.7E-18
ProSiteProfiles PS50931 LysR-type HTH domain profile. IPR000847 Transcription regulator HTH, LysR 23 80 27.213
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 22 132 6.41E-23
Pfam PF03466 LysR substrate binding domain IPR005119 LysR, substrate-binding 109 311 4.8E-40
SUPERFAMILY SSF53850 110 314 1.99E-41

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.