Burkholderia cenocepacia AU 1054, BCEN_RS13765

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0015935 small ribosomal subunit
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00403_B
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00164
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00403_B
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00403_B
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF002133 IPR006032 Ribosomal protein S12/S23 1 124 7.6E-57
SUPERFAMILY SSF50249 IPR012340 Nucleic acid-binding, OB-fold 2 123 8.05E-52
PRINTS PR01034 Ribosomal protein S12 signature IPR006032 Ribosomal protein S12/S23 94 110 1.4E-59
Pfam PF00164 Ribosomal protein S12/S23 IPR006032 Ribosomal protein S12/S23 12 123 6.0E-43
ProSitePatterns PS00055 Ribosomal protein S12 signature. IPR006032 Ribosomal protein S12/S23 43 50 -
TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 IPR005679 Ribosomal protein S12, bacterial-type 1 124 8.2E-71
PRINTS PR01034 Ribosomal protein S12 signature IPR006032 Ribosomal protein S12/S23 27 42 1.4E-59
MobiDBLite mobidb-lite consensus disorder prediction 1 28 -
PRINTS PR01034 Ribosomal protein S12 signature IPR006032 Ribosomal protein S12/S23 42 57 1.4E-59
MobiDBLite mobidb-lite consensus disorder prediction 1 24 -
MobiDBLite mobidb-lite consensus disorder prediction 103 126 -
CDD cd03368 Ribosomal_S12 IPR005679 Ribosomal protein S12, bacterial-type 3 110 2.23005E-68
Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. IPR005679 Ribosomal protein S12, bacterial-type 1 123 39.857
PRINTS PR01034 Ribosomal protein S12 signature IPR006032 Ribosomal protein S12/S23 58 77 1.4E-59
PRINTS PR01034 Ribosomal protein S12 signature IPR006032 Ribosomal protein S12/S23 77 94 1.4E-59
PRINTS PR01034 Ribosomal protein S12 signature IPR006032 Ribosomal protein S12/S23 110 122 1.4E-59
Gene3D G3DSA:2.40.50.140 1 126 1.3E-63

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.