Burkholderia cenocepacia AU 1054, BCEN_RS12985
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: TCGCGATCGCG-N54-CGCGATCGCGA | 2864971 | 2865046 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: TCGCGATCGCG-N54-CGCGATCGCGA | 2864971 | 2865046 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GATCGGCGTCG-N61-CGACGCCGATC | 2863659 | 2863741 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GATCGGCGTCG-N61-CGACGCCGATC | 2863659 | 2863741 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGGGTCGAGC-N34-GCTCGACCCG | 2863942 | 2863995 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGGGTCGAGC-N34-GCTCGACCCG | 2863942 | 2863995 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGCGCGCTTC-N24-GAAGCGCGCG | 2864331 | 2864374 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGCGCGCTTC-N24-GAAGCGCGCG | 2864331 | 2864374 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Rho-independent transcription terminator TERM 889 | 2863331 | 2863360 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 890 | 2863337 | 2863354 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 891 | 2863337 | 2863354 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Inverted repeat: AAAAAGCCCCGC-N4-GCGGGGCTTTTT | 2863332 | 2863359 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: AAAAAGCCCCGC-N4-GCGGGGCTTTTT | 2863332 | 2863359 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |