Burkholderia cenocepacia AU 1054, BCEN_RS12590

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00079
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015276 ligand-gated ion channel activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00079
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.190.10 34 248 3.7E-72
Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 37 254 1.7E-64
SUPERFAMILY SSF53850 7 256 1.49E-72
SMART SM00062 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 35 256 3.8E-71
CDD cd13711 PBP2_Ngo0372_TcyA 34 257 6.10266E-131
SMART SM00079 IPR001320 Ionotropic glutamate receptor 35 255 0.0042
ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. IPR018313 Solute-binding protein family 3, conserved site 58 71 -
Gene3D G3DSA:3.40.190.10 118 217 3.7E-72

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.