Burkholderia cenocepacia AU 1054, BCEN_RS12535

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00126	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00126	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF46785		IPR036390	Winged helix DNA-binding domain superfamily	3	112	4.16E-22
Gene3D	G3DSA:3.40.190.10				164	264	7.4E-60
SUPERFAMILY	SSF53850				89	295	8.32E-45
Gene3D	G3DSA:3.40.190.10				92	291	7.4E-60
CDD	cd08422	PBP2_CrgA_like			92	289	1.65076E-75
Gene3D	G3DSA:1.10.10.10		IPR036388	Winged helix-like DNA-binding domain superfamily	3	89	4.1E-26
MobiDBLite	mobidb-lite	consensus disorder prediction			318	349	-
ProSiteProfiles	PS50931	LysR-type HTH domain profile.	IPR000847	Transcription regulator HTH, LysR	1	59	25.243
Pfam	PF03466	LysR substrate binding domain	IPR005119	LysR, substrate-binding	89	293	1.1E-46
Pfam	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family	IPR000847	Transcription regulator HTH, LysR	4	63	3.2E-17

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.