Burkholderia cenocepacia AU 1054, BCEN_RS12320
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0008270 | zinc ion binding |
Inferred from Sequence Model
Term mapped from: InterPro:PS51128
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| ProSiteProfiles | PS51128 | Prokaryotic dksA C4-type zinc finger profiles. | IPR000962 | Zinc finger, DksA/TraR C4-type | 58 | 138 | 27.15 |
| TIGRFAM | TIGR02420 | dksA: RNA polymerase-binding protein DksA | IPR012784 | RNA polymerase-binding transcription factor DksA | 20 | 128 | 8.4E-43 |
| Pfam | PF01258 | Prokaryotic dksA/traR C4-type zinc finger | IPR000962 | Zinc finger, DksA/TraR C4-type | 96 | 130 | 4.1E-11 |
| Hamap | MF_00926 | RNA polymerase-binding transcription factor DksA [dksA]. | IPR012784 | RNA polymerase-binding transcription factor DksA | 16 | 137 | 28.152 |
| SUPERFAMILY | SSF57716 | 98 | 136 | 2.28E-8 | |||
| Gene3D | G3DSA:1.20.120.910 | 4 | 136 | 6.6E-38 | |||
| SUPERFAMILY | SSF109635 | IPR037187 | DksA, N-terminal domain superfamily | 5 | 97 | 3.79E-29 | |
| ProSitePatterns | PS01102 | Prokaryotic dksA C4-type zinc finger. | IPR020458 | Zinc finger, DksA/TraR C4-type conserved site | 101 | 125 | - |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.