Burkholderia cenocepacia AU 1054, BCEN_RS12055
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:SM00347
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:SM00347
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF13463 | Winged helix DNA-binding domain | IPR000835 | MarR-type HTH domain | 52 | 117 | 2.4E-20 |
| SMART | SM00347 | IPR000835 | MarR-type HTH domain | 45 | 145 | 0.0094 | |
| Gene3D | G3DSA:1.10.10.10 | IPR036388 | Winged helix-like DNA-binding domain superfamily | 23 | 158 | 8.2E-10 | |
| SUPERFAMILY | SSF46785 | IPR036390 | Winged helix DNA-binding domain superfamily | 23 | 157 | 2.47E-14 | |
| PIRSF | PIRSF036158 | IPR014601 | Transcriptional regulator with MarR-type HTH domain | 1 | 170 | 3.3E-66 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.