Burkholderia cenocepacia AU 1054, BCEN_RS11740

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00356	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00356	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:1.10.260.40				1	57	4.7E-17
CDD	cd06267	PBP1_LacI_sugar_binding_like			71	318	4.65633E-66
SUPERFAMILY	SSF47413		IPR010982	Lambda repressor-like, DNA-binding domain superfamily	3	51	3.09E-12
CDD	cd01392	HTH_LacI	IPR000843	LacI-type HTH domain	6	57	7.18881E-14
SUPERFAMILY	SSF53822		IPR028082	Periplasmic binding protein-like I	71	314	6.34E-54
ProSitePatterns	PS00356	LacI-type HTH domain signature.			5	23	-
ProSiteProfiles	PS50932	LacI-type HTH domain profile.	IPR000843	LacI-type HTH domain	3	57	23.632
Pfam	PF00356	Bacterial regulatory proteins, lacI family	IPR000843	LacI-type HTH domain	4	48	5.8E-14
Pfam	PF13377	Periplasmic binding protein-like domain			163	323	1.3E-31
Gene3D	G3DSA:3.40.50.2300				154	320	5.9E-59
Gene3D	G3DSA:3.40.50.2300				72	315	5.9E-59
SMART	SM00354		IPR000843	LacI-type HTH domain	2	57	5.8E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.