Burkholderia cenocepacia AU 1054, BCEN_RS11610

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016829 lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00146
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009089 lysine biosynthetic process via diaminopimelate
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00950
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008840 4-hydroxy-tetrahydrodipicolinate synthase
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00950
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.20.20.70
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc L-lysine biosynthesis VI InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00300 Lysine biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG (InterPro) 00261 Monobactam biosynthesis InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc L-lysine biosynthesis III InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc L-lysine biosynthesis II InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF001365 IPR002220 DapA-like 1 296 8.7E-78
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 129 146 6.2E-15
Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA 4 286 43.893
SUPERFAMILY SSF51569 2 287 2.09E-80
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 72 90 6.2E-15
ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. IPR020625 Schiff base-forming aldolase, active site 134 164 -
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 104 120 6.2E-15
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 37 58 6.2E-15
TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA 12 285 1.4E-66
Pfam PF00701 Dihydrodipicolinate synthetase family IPR002220 DapA-like 5 283 1.9E-57
CDD cd00950 DHDPS IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA 5 283 4.09595E-111
SMART SM01130 IPR002220 DapA-like 4 288 1.4E-95
Gene3D G3DSA:3.20.20.70 IPR013785 Aldolase-type TIM barrel 1 288 3.4E-84

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.