Burkholderia cenocepacia AU 1054, BCEN_RS11540
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Rho-independent transcription terminator TERM 772 | 2556634 | 2556651 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 773 | 2556835 | 2556868 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 774 | 2556837 | 2556865 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Inverted repeat: CCGCGCGGCATC-N5-GATGCCGCGCGG | 2556837 | 2556865 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CCGCGCGGCATC-N5-GATGCCGCGCGG | 2556837 | 2556865 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Rho-independent transcription terminator TERM 773 | 2556835 | 2556868 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 774 | 2556837 | 2556865 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Inverted repeat: CCGCGCGGCATC-N5-GATGCCGCGCGG | 2556837 | 2556865 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CCGCGCGGCATC-N5-GATGCCGCGCGG | 2556837 | 2556865 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCGCTCGCGC-N31-GCGCGAGCGC | 2557962 | 2558012 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCGCTCGCGC-N31-GCGCGAGCGC | 2557962 | 2558012 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: TCGCGTTCGA-N59-TCGAACGCGA | 2558023 | 2558101 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: TCGCGTTCGA-N59-TCGAACGCGA | 2558023 | 2558101 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CTCCGATGCG-N98-CGCATCGGAG | 2558623 | 2558740 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CTCCGATGCG-N98-CGCATCGGAG | 2558623 | 2558740 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |