Burkholderia cenocepacia AU 1054, BCEN_RS11290

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50931
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50931
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction 296 320 -
Gene3D G3DSA:3.40.190.290 90 293 8.3E-47
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 1 110 2.47E-20
CDD cd08422 PBP2_CrgA_like 91 289 1.99014E-41
ProSiteProfiles PS50931 LysR-type HTH domain profile. IPR000847 Transcription regulator HTH, LysR 1 58 27.877
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 1 87 7.1E-20
Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IPR000847 Transcription regulator HTH, LysR 3 61 2.3E-16
SUPERFAMILY SSF53850 87 296 5.89E-41
Pfam PF03466 LysR substrate binding domain IPR005119 LysR, substrate-binding 87 293 3.2E-37

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.