Burkholderia cenocepacia AU 1054, BCEN_RS11015

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00866
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00035
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00866
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF64288 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily 69 244 3.14E-43
PRINTS PR00035 GntR bacterial regulatory protein HTH signature IPR000524 Transcription regulator HTH, GntR 55 71 1.9E-8
Pfam PF07702 UTRA domain IPR011663 UbiC transcription regulator-associated 102 237 2.3E-34
SMART SM00345 IPR000524 Transcription regulator HTH, GntR 22 81 5.5E-15
Gene3D G3DSA:3.40.1410.10 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily 83 244 2.5E-41
CDD cd07377 WHTH_GntR IPR000524 Transcription regulator HTH, GntR 17 82 1.57067E-19
SUPERFAMILY SSF46785 IPR036390 Winged helix DNA-binding domain superfamily 11 84 5.69E-20
PRINTS PR00035 GntR bacterial regulatory protein HTH signature IPR000524 Transcription regulator HTH, GntR 41 55 1.9E-8
SMART SM00866 IPR011663 UbiC transcription regulator-associated 101 237 1.3E-34
Pfam PF00392 Bacterial regulatory proteins, gntR family IPR000524 Transcription regulator HTH, GntR 18 81 3.0E-15
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 11 82 2.4E-21
ProSiteProfiles PS50949 GntR-type HTH domain profile. IPR000524 Transcription regulator HTH, GntR 16 84 22.208

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.