Burkholderia cenocepacia AU 1054, BCEN_RS06250

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50928
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50928
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSiteProfiles PS50928 ABC transporter integral membrane type-1 domain profile. IPR000515 ABC transporter type 1, transmembrane domain MetI-like 67 256 20.098
Gene3D G3DSA:1.10.3720.10 IPR035906 MetI-like superfamily 56 267 2.2E-18
CDD cd06261 TM_PBP2 IPR000515 ABC transporter type 1, transmembrane domain MetI-like 67 239 1.29955E-15
SUPERFAMILY SSF161098 IPR035906 MetI-like superfamily 62 249 2.88E-25
Pfam PF00528 Binding-protein-dependent transport system inner membrane component IPR000515 ABC transporter type 1, transmembrane domain MetI-like 85 266 8.3E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.