Burkholderia cenocepacia AU 1054, BCEN_RS06115
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:cd06261
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:cd06261
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd06261 | TM_PBP2 | IPR000515 | ABC transporter type 1, transmembrane domain MetI-like | 97 | 274 | 4.21326E-8 |
| Gene3D | G3DSA:1.10.3720.10 | IPR035906 | MetI-like superfamily | 90 | 289 | 2.0E-20 | |
| Pfam | PF00528 | Binding-protein-dependent transport system inner membrane component | IPR000515 | ABC transporter type 1, transmembrane domain MetI-like | 106 | 290 | 1.4E-13 |
| SUPERFAMILY | SSF161098 | IPR035906 | MetI-like superfamily | 90 | 276 | 6.8E-24 | |
| ProSiteProfiles | PS50928 | ABC transporter integral membrane type-1 domain profile. | IPR000515 | ABC transporter type 1, transmembrane domain MetI-like | 91 | 280 | 16.832 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.