Burkholderia cenocepacia AU 1054, BCEN_RS03275

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0043043 peptide biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF09285
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00038
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003746 translation elongation factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00038
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006414 translational elongation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00038
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF005901 IPR020599 Translation elongation factor P/YeiP 1 185 1.7E-57
SUPERFAMILY SSF50249 IPR012340 Nucleic acid-binding, OB-fold 128 185 3.43E-15
Gene3D G3DSA:2.30.30.30 IPR014722 Ribosomal protein L2, domain 2 1 62 1.8E-18
Gene3D G3DSA:2.40.50.140 127 185 2.0E-26
ProSitePatterns PS01275 Elongation factor P signature. IPR013852 Translation elongation factor P/YeiP, conserved site 150 169 -
Pfam PF01132 Elongation factor P (EF-P) OB domain IPR001059 Translation elongation factor P/YeiP, central 68 120 7.1E-17
CDD cd05794 S1_EF-P_repeat_2 IPR015365 Elongation factor P, C-terminal 128 184 9.42863E-23
SUPERFAMILY SSF50104 IPR008991 Translation protein SH3-like domain superfamily 1 63 1.2E-15
TIGRFAM TIGR00038 efp: translation elongation factor P IPR011768 Translation elongation factor P 3 185 2.7E-63
SUPERFAMILY SSF50249 IPR012340 Nucleic acid-binding, OB-fold 65 126 3.43E-16
Pfam PF09285 Elongation factor P, C-terminal IPR015365 Elongation factor P, C-terminal 129 184 6.6E-25
SMART SM01185 IPR001059 Translation elongation factor P/YeiP, central 67 120 4.1E-20
Pfam PF08207 Elongation factor P (EF-P) KOW-like domain IPR013185 Translation elongation factor, KOW-like 3 60 3.6E-17
SMART SM00841 IPR015365 Elongation factor P, C-terminal 128 184 1.1E-29
Hamap MF_00141 Elongation factor P [efp]. IPR011768 Translation elongation factor P 1 185 46.945
Gene3D G3DSA:2.40.50.140 64 126 2.4E-22
CDD cd04470 S1_EF-P_repeat_1 IPR001059 Translation elongation factor P/YeiP, central 66 125 7.16575E-21

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.