Burkholderia cenocepacia AU 1054, BCEN_RS03095
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CGCGCCGATC-N43-GATCGGCGCG | 670834 | 670896 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGCGCCGATC-N43-GATCGGCGCG | 670834 | 670896 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: TTGCGCGGCGAG-N66-CTCGCCGCGCAA | 671400 | 671489 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: TTGCGCGGCGAG-N66-CTCGCCGCGCAA | 671400 | 671489 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGAGCTTGCCG-N94-CGGCAAGCTCG | 671441 | 671556 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGAGCTTGCCG-N94-CGGCAAGCTCG | 671441 | 671556 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: ACGCGCCGCC-N93-GGCGGCGCGT | 672106 | 672218 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: ACGCGCCGCC-N93-GGCGGCGCGT | 672106 | 672218 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGCCGAGCAGC-N64-GCTGCTCGGCG | 672581 | 672666 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGCCGAGCAGC-N64-GCTGCTCGGCG | 672581 | 672666 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Rho-independent transcription terminator TERM 235 | 672738 | 672755 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 236 | 672738 | 672755 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Palindrome | 672734 | 672759 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Palindrome | 672734 | 672759 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |