Burkholderia cenocepacia K56-2Valvano, BURCENK562V_RS28235 (tssB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0033103 | protein secretion by the type VI secretion system | Inferred from Mutant Phenotype | ECO:0000315 mutant phenotype evidence used in manual assertion |
18316384 | Reviewed by curator |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF05591 | Type VI secretion system, VipA, VC_A0107 or Hcp2 | IPR008312 | Type VI secretion system, VipA, VC_A0107 or Hcp2 | 12 | 162 | 8.0E-61 |
| Coils | Coil | 140 | 160 | - | |||
| TIGRFAM | TIGR03358 | VI_chp_5: type VI secretion protein, VC_A0107 family | IPR008312 | Type VI secretion system, VipA, VC_A0107 or Hcp2 | 8 | 162 | 1.2E-59 |
| PIRSF | PIRSF028301 | IPR008312 | Type VI secretion system, VipA, VC_A0107 or Hcp2 | 2 | 171 | 1.9E-68 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.