Motif View

Internal ID 1787497
Source Database TransTermHP TERM 64
Feature Type terminator
Name
Rho-independent transcription terminator TERM 64
Sequence CGGCGGCCGCACCGAGGCGGCCGCCG
Look for more occurrences
Start 411663
End 411688
Strand +
Genomic Context
Replicon Burkholderia cenocepacia H111 chromosome 2, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGCTGAAGCAGCATG(5' tail) CGGCGGCCGC(5' stem) ACCGAG(loop) GCGGCCGCCG(3' stem) GTTTCCATTCACTGA(3' tail). Confidence: 93. opp_overlap 411658, overlap 411662

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685