Motif View

Internal ID 1787496
Source Database TransTermHP TERM 63
Feature Type terminator
Name
Rho-independent transcription terminator TERM 63
Sequence GCGGCGGCCGCACCGAGGCGGCCGCCGG
Look for more occurrences
Start 411662
End 411689
Strand +
Genomic Context
Replicon Burkholderia cenocepacia H111 chromosome 2, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TAGCTGAAGCAGCAT(5' tail) GCGGCGGCCGC(5' stem) ACCGAG(loop) GCGGCCGCCGG(3' stem) TTTCCATTCACTGAC(3' tail). Confidence: 90. opp_overlap 411658, overlap 411663

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685