Motif View

Internal ID 1787280
Source Database TransTermHP TERM 1018
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1018
Sequence GGCCGGCCAATCGATAATCGATTGGCCGGCC
Look for more occurrences
Start 2798163
End 2798193
Strand +
Genomic Context
Replicon Burkholderia cenocepacia H111 chromosome 1 complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGTTTCTTTTTTTGT(5' tail) GGCCGGCCAATCGA(5' stem) TAA(loop) TCGATTGGCCGGCC(3' stem) TTTTCGTTCAATCCC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685