Burkholderia Genome Database

Burkholderia mallei China_7

Strain Overview
Organism Name	Burkholderia mallei China_7
Species	Burkholderia mallei
Strain	China_7
Description/Title	Pathogen sample from Burkholderia mallei
Annotated Genes	4760
Partial Genes	118

Host Information
Host Species Taxonomic Name
Host Species Common Name	Homo sapiens

Geographic Location
Location Name	China
Isolation Source	knee fluid
Latitude/Longitude	unknown

Sample Provider
Name	Jason Sahl
E-mail	jasonsahl@gmail.com
Institution	Translational Genomics Research Institute
Date Collected	1944

MLST Data

Database	Scheme	Sequence Type	Alleles
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).

Assembly
Assembly DB	RefSeq
Assembly Accession	GCF_000565365.2
Assembly Status	latest
Scaffolds
Contigs	197
Contig N50	58933
Assembly Level	Contig
Percent GC

Cross-References
NCBI BioSample Accession	SAMN02303033
NCBI Taxonomy ID	1382519
NCBI Bioprojects	PRJNA214255

Related Data
Additional Genome Project Info	More on PRJNA214255
Sequencing Information	Details
Genome Assembly Information	Details

Annotated Features

Feature	Count
gene	4760
CDS	4704
pseudo	189
tRNA	51
rRNA	4
ncRNA	1

Subcellular Localization

Localization	Count
Cytoplasmic	2045
Cytoplasmic Membrane	961
Periplasmic	158
Outer Membrane	103
Extracellular	74
Unknown	1280
Unknown (This protein may have multiple localization sites)	142
Flagellar	22
Fimbrial	3
Host Associated	2
T3SS	2

Replicons

197 replicons associated with this assembly

Download Sequences

Download Gene Annotations

GFF3 + sequence