| Strain Overview | |
|---|---|
| Organism Name | Burkholderia gladioli NBRC 13700 |
| Species | Burkholderia gladioli |
| Strain | NBRC 13700 |
| Description/Title | Burkholderia gladioli NBRC 13700 |
| Annotated Genes | 7468 |
| Partial Genes | 439 |
| Host Information | |
|---|---|
| Host Species Taxonomic Name |
| Geographic Location | |
|---|---|
| Location Name | NA |
| Latitude/Longitude | NA |
| Environmental Feature (?) | NA |
| Environmental Material (?) | NA |
| Sample Provider | |
|---|---|
| Name | |
| Institution | National Institute of Technology and Evaluation Biological Resource Center |
| Date Collected | NA |
| Database | Scheme | Sequence Type | Alleles | |
|---|---|---|---|---|
| Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst). | ||||
| Assembly | |
|---|---|
| Assembly DB |
RefSeq
|
| Assembly Accession | Assembly Status | latest |
| Scaffolds | |
| Contigs | 185 |
| Contig N50 | 97515 |
| Assembly Level | Contig |
| Percent GC |
| Cross-References | |
|---|---|
| NCBI BioSample Accession | SAMD00017341 |
| NCBI Taxonomy ID | 1218079 |
| NCBI Bioprojects |
| Related Data | |
|---|---|
| Additional Genome Project Info | |
| Sequencing Information | |
| Genome Assembly Information |
| Feature | Count |
|---|---|
| gene | 7468 |
| CDS | 7345 |
| tRNA | 61 |
| pseudo | 56 |
| rRNA | 3 |
| ncRNA | 3 |
| Localization | Count |
|---|---|
| Cytoplasmic | 3198 |
| Cytoplasmic Membrane | 1569 |
| Periplasmic | 211 |
| Outer Membrane | 188 |
| Extracellular | 122 |
| Unknown | 1805 |
| Unknown (This protein may have multiple localization sites) | 251 |
| Flagellar | 3 |
| Host Associated | 1 |
| Genomic | ORF DNA | Intergenic | Amino Acid |
| TSV | CSV | GBK | EMBL | GFF3 | GFF3 + sequence | GTF |