Motif View

Internal ID 1786658
Source Database TransTermHP TERM 142
Feature Type terminator
Name
Rho-independent transcription terminator TERM 142
Sequence GGACCGCCAGGCGGTCC
Look for more occurrences
Start 347936
End 347952
Strand +
Genomic Context
Replicon Burkholderia cenocepacia H111 chromosome 1 complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCAAAAGCAGAAAA(5' tail) GGACCGC(5' stem) CAG(loop) GCGGTCC(3' stem) TTTTCTCATGAAGCG(3' tail). Confidence: 100. opp_overlap 347931 347928 347936

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685