Motif View

Internal ID 1764918
Source Database TransTermHP TERM 326
Feature Type terminator
Name
Rho-independent transcription terminator TERM 326
Sequence CGGGCCGCTCGAAAGAGCGGCCCG
Look for more occurrences
Start 1632171
End 1632194
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCGCACAACGACAA(5' tail) CGGGCCGCTC(5' stem) TTTC(loop) GAGCGGCCCG(3' stem) TTTTCATTGATGCCC(3' tail). Confidence: 100. opp_overlap 1632171, overlap 1632166 1632165

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685