Motif View

Internal ID 1764914
Source Database TransTermHP TERM 324
Feature Type terminator
Name
Rho-independent transcription terminator TERM 324
Sequence TGAAAACGGGCCGCTCGAAAGAGCGGCCCGTTGTCG
Look for more occurrences
Start 1632165
End 1632200
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ATGCTGGGCGCACAA(5' tail) CGACAACGGGCCGCTC(5' stem) TTTC(loop) GAGCGGCCCGTTTTCA(3' stem) TTGATGCCCAGCCAA(3' tail). Confidence: 95. opp_overlap 1632171, overlap 1632166 1632171

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685