Motif View

Internal ID 1761263
Source Database TransTermHP TERM 1035
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1035
Sequence GCCGCGCCGTCGCGCGGC
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Start 3282243
End 3282260
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CACGCGATGAAAAAA(5' tail) GCCGCGC(5' stem) GACG(loop) GCGCGGC(3' stem) TTGCACGGATCTTGC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685