Motif View

Internal ID 1761255
Source Database TransTermHP TERM 1011
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1011
Sequence CGGCGCGACGTGTCGGGGCCGGTTGGGGCCGGCACGTCGCGCGG
Look for more occurrences
Start 3219313
End 3219356
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AATAAGGAAATCGAA(5' tail) CCGCGCGACGTGCCGGCCCC(5' stem) AACC(loop) GGCCCCGACACGTCGCGCCG(3' stem) GCTTCGGCAATCAGA(3' tail). Confidence: 100. overlap 3219309 3219308

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685