Motif View

Internal ID 1761243
Source Database TransTermHP TERM 991
Feature Type terminator
Name
Rho-independent transcription terminator TERM 991
Sequence CGGGCGCCCCTGGCGCCCG
Look for more occurrences
Start 3138296
End 3138314
Strand +
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCAGGTAATTTCGA(5' tail) CGGGCGCC(5' stem) CCT(loop) GGCGCCCG(3' stem) TTTTTCATTTCCGCG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685