Internal ID | 1761226 | Source Database | TransTermHP TERM 968 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 968
|
Sequence |
CCGAACGCCCCGTCCCTCGCGAGAGGGTGGGGCGTTCGG Look for more occurrences |
Start | 3077123 |
End | 3077161 |
Strand | - |
Genomic Context | |
Replicon | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | AGCGGCGCCAAAAAG(5' tail) CCGAACGCCCCA-CCCTC(5' stem) TCGC(loop) GAGGGACGGGGCGTTCGG(3' stem) TACGCCGGTGTCGGC(3' tail). Confidence: 100. gap 1, opp_overlap 3077128, overlap 3077110 3077122 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685
|