Motif View

Internal ID 1761220
Source Database TransTermHP TERM 962
Feature Type terminator
Name
Rho-independent transcription terminator TERM 962
Sequence CCGCCTGCTTGATCGCAGGCGG
Look for more occurrences
Start 3067758
End 3067779
Strand +
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CACTGGCCAGGAAAA(5' tail) CCGCCTGC(5' stem) TTGATC(loop) GCAGGCGG(3' stem) TTTTTTTTCGTCCGT(3' tail). Confidence: 100. opp_overlap 3067758

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685