Motif View

Internal ID 1761206
Source Database TransTermHP TERM 943
Feature Type terminator
Name
Rho-independent transcription terminator TERM 943
Sequence GCGCGTTTGTTTGCGC
Look for more occurrences
Start 3009958
End 3009973
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TTCCTCAAACAAAAA(5' tail) GCGCA(5' stem) AACAAA(loop) CGCGC(3' stem) GGTCAGCCTTGGCGC(3' tail). Confidence: 93.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685