Motif View

Internal ID 1761173
Source Database TransTermHP TERM 904
Feature Type terminator
Name
Rho-independent transcription terminator TERM 904
Sequence GGACCGCCACGCGGTCC
Look for more occurrences
Start 2910440
End 2910456
Strand -
Genomic Context
Replicon Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCTTCATGGAAAAA(5' tail) GGACCGC(5' stem) GTG(loop) GCGGTCC(3' stem) TTTTTTGCTGTGGCG(3' tail). Confidence: 100. opp_overlap 2910440

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL.
Genome Biol. 2007;8(2):R22.
PubMed ID: 17313685